Here are some more log output:
Error log
[12-Apr-2018 00:20:02 UTC] PHP Strict Standards: Declaration of ListViewPackages::setup() should be compatible with ListViewDisplay::setup($seed, $file, $where, $params = Array, $offset = 0, $limit = -1, $filter_fields = Array, $id_field = ‘id’, $id = NULL) in /home/wafracrm/dev/ModuleInstall/PackageManager/ListViewPackages.php on line 42
[12-Apr-2018 00:22:42 UTC] PHP Fatal error: Call to undefined method EmailAddress::getSendConfirmOptInEmailActionLinkDefs() in /home/wafracrm/dev/cache/upgrades/temp/FY6vE8/SuiteCRM-Upgrade-7.9.x-to-7.10.4/modules/Contacts/metadata/detailviewdefs.php on line 51
Last of upgradeWizard.log
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/README.md
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/tpls/ModuleLoaderListView.tpl
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/metadata/listviewdefs.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManagerDownloader.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManagerDisplay.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManagerComm.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManager.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageController.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/ListViewPackages.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/ModuleScanner.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/HandleAjaxCall.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - file backup done.
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Running pre_install()…
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - pre_install() done.
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/README.md
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/tpls/ModuleLoaderListView.tpl
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/metadata/listviewdefs.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManagerDownloader.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManagerDisplay.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManagerComm.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageManager.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/PackageController.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/PackageManager/ListViewPackages.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/ModuleInstall/ModuleScanner.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Backing up file: /home/wafracrm/dev/HandleAjaxCall.php
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - file backup done.
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - Running pre_install()…
Thu, 12 Apr 2018 00:22:42 +0000 [UpgradeWizard] - pre_install() done.